Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905273.1_cds_XP_016455473.1_49403
CDS Infomation

[gene=LOC107779537] [db_xref=GeneID:107779537] [protein=reticuline oxidase-like] [protein_id=XP_016455473.1] [location=48346..50049] [gbkey=CDS]
Sequence

ATGAAACGAAATATATCCATGTTTCTTCAGCTTCTGCTCATTATTCTGATGATGATCAGC
TTCTTATTTACTTCTCTTCTTGTACCTTCGGTCTCTGCAACAACTCTCAATACCATTTCC
ACCTGTTTAATCAATTACAAAGTCAGTAACTTCTCTGTTTACCCAACAAGGAATCATGCT
GGTAATAGTTACTATAACTTGCTTGATTTCTCCATTCAGAATCTCCGATTCGCAGCGTGC
TCTAAACCAAAACCAACTGTCATTATCGTACCAGAGAGCAAGGAGCAGCTGGTGAGCAGC
GTTCTGTGTTGCAGACAAGGCTCGTATGAAATCAGAGTAAGGTGCGGTGGACACAGTTAT
GAAGGGACTTCATCAGTTTCCTTTGATGGTTCCCCATTTGTGGTCATTGATTTGATGAAA
TTAGACGGCGTTTCAGTGGATGTGGATTCAGAAACCGCGTGGGTACAGGGCGGCGCTACA
CTTGGCCAGACTTATTATGCCATTTCCCGAGCCAGCAACGTTCATGGATTTTCAGCTGGT
TCTTGCCCAACAGTTGGGGTTGGCGGGCACATTTCCGGGGGTGGTTACGGATTTTTATCC
AGAAAATATGGACTTGCTGCTGATAACGTGGTGGATGCTCTTCTTGTTGATGCGGAAGGA
CGGCTATTAGACCGCAAAGCCATGGGAGAAGAAATCTTTTGGGCCATCAGAGGTGGAGGT
GGAGGAATTTGGGGAATCATTTACGCCTGGAAAATCCGATTGCTCAAAGTGCCCAAGACC
GTGACCAGTTTCATAATCCCTAGGCCTGGCTCCAAACGATATGTGTCCCAACTAGTTCAC
AAATGGCAACTTGTTGCACCAAAGTTAGAGGATGAATTTTATCTATCGATCTCCATGAGC
TCTCCTAGTAAAGGAAACATTCCTATTGAAATAAATGCCCAATTCAGCGGATTTTACCTA
GGTACAAAAACCGAAGCCATTTCCATCTTGAATGAGGCCTTTTCGGAGTTGGGAGTTCTG
GAAGGTGACTGCAAAGAAATGAGTTGGATTGAATCAACACTTTTCTTCTCCGAATTAGAT
GACGTTGCGAATTCCTCCGATGTCTCTCGTTTGAAAGAGCGTTACTTTGAAAACAAATCA
TACTTCAAAGCCAAATCAGACTATGTGAAGACCCCAATTTCAGTGGGTGGGATTATGACG
GCTCTTAATGTTCTTGAGAAAGAACCCAACGGACATGTCATCTTGGACCCTTATGGTGGA
GCCATGCAAAGAATTAGTGAGGAAGCTATTGCTTTCCCTCATAGAAAGGGTAACCTTTTC
GGAATTCAATATCTAGTAGTGTGGAAAGAAAAGGACAATAATAATATTGTCAAGAGCAAT
ATTGGGTACATAGAGTGGATAAGAGAGTTTTACAATACAATGGCACCCCATGTTTCAAGT
TCACCTAGGGCAGCTTATGTCAACTACATGGATCTGGACCTTGGAGTGATGGACGACTAC
TTATTGCCATGTACTAGTACTACTGCGTCTGCTAATCATGCCGTGGAGAGAGCAAGGGTC
TGGGGTGAAAAGTATTTCTTGAATAACTATGATAGATTGGTCAAAGCTAAGACAAAAATT
GACCCACTAAACGTTTTTCGACATCAACAGGGCATCCCTCCTTTGTTCGCCTCAATGCAA
GAGTATACCTATAGTAGTAAATGA

Peptide Sequence

PEP ID

XP_016455473.1
PEP Infomation

PREDICTED: reticuline oxidase-like [Nicotiana tabacum]
Sequence

MKRNISMFLQLLLIILMMISFLFTSLLVPSVSATTLNTISTCLINYKVSNFSVYPTRNHA
GNSYYNLLDFSIQNLRFAACSKPKPTVIIVPESKEQLVSSVLCCRQGSYEIRVRCGGHSY
EGTSSVSFDGSPFVVIDLMKLDGVSVDVDSETAWVQGGATLGQTYYAISRASNVHGFSAG
SCPTVGVGGHISGGGYGFLSRKYGLAADNVVDALLVDAEGRLLDRKAMGEEIFWAIRGGG
GGIWGIIYAWKIRLLKVPKTVTSFIIPRPGSKRYVSQLVHKWQLVAPKLEDEFYLSISMS
SPSKGNIPIEINAQFSGFYLGTKTEAISILNEAFSELGVLEGDCKEMSWIESTLFFSELD
DVANSSDVSRLKERYFENKSYFKAKSDYVKTPISVGGIMTALNVLEKEPNGHVILDPYGG
AMQRISEEAIAFPHRKGNLFGIQYLVVWKEKDNNNIVKSNIGYIEWIREFYNTMAPHVSS
SPRAAYVNYMDLDLGVMDDYLLPCTSTTASANHAVERARVWGEKYFLNNYDRLVKAKTKI
DPLNVFRHQQGIPPLFASMQEYTYSSK

Transcript Sequence

Gene sequence data has not been registered.